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### Issue description
Only with `method = "bayes"` we can set the number of maximal allowed parents individually per node.
### MRE
```
### Generate data
# Set seed for reproducibility
set.s…
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Consider adding Approximate Bayes Factor. See example script.
[abf.R.txt](https://github.com/variani/finemapr/files/2040788/abf.R.txt)
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Is there a maximum number of accepted factor levels when training naive bayes? I just only got missing values returned on a multiclass classification problem with 37 factor levels and 25k records.
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Thermodynamic methods provide a way to estimate marginal likelihoods (aka model evidence) using MCMC, serving as an alternative to nested sampling methods.
Some related papers:
1. Friel, Nial, a…
yebai updated
4 years ago
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### Description
Uniform priors / models
### Purpose
Test hypothesis that are best modelled by uniform distributions
### Use-case
Any situation where a uniform distribution is more appropriate tha…
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Personally, I find it a bit confusing that when the option "Compare to best model" is selected, the output table says "BF10" which is in fact not the Bayes factor against the null model but against th…
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@janeyho
Nice work, I could understand the code well, well documented, I think I ran into a similar problem like the one in your line 28, I took Justin's help and understood the way to apply feature…
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We should run a Bayes Factor test for strict vs uncorrelated lognormal clocks. I don't think that we have enough data to support a more complex model, but worth checking out.
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Thank you for developing an exciting tool!
From your experience developing the tool, what factors most impact the bayes factor in predicting cell phase? Number of input known cycling genes, normal…
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- [ ] Improve model swap acceptance for the 'All' cases
In general, model swap acceptance ratios are lower for 'All' cases than they are for 'rhol+psat' cases. We should look at using better Q pro…