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This issue was created in another repo:
https://github.com/biothings/BioThings_Explorer_TRAPI/issues/117
Moving future discussion here.
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- API URL: https://biothings.ncats.io/multiomics_wellness_kp
- Github URL: https://github.com/Hadlock-Lab/Multiomics_Wellness_KP
- Git branch/commit: [1585146](https://github.com/Hadlock-Lab/multiom…
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Upgrade `tornado` to version `6.3.3` to fix the security issues below:
- https://github.com/biothings/biothings.api/security/dependabot/2
- https://github.com/biothings/biothings.api/security/depend…
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Right now WF2's setup requires the MyGene client, and drawing the MyGene client from PyPI gives you a blank MyGene object which makes the code fail to import the module.
It seems like that the team…
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Many APIs haven't been updated since first creation. For example, https://biothings.ncats.io/go_bp, https://biothings.ncats.io/go_cc, and https://biothings.ncats.io/go_mf haven't been updated since 20…
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Often, we use temporary overrides or other config adjustments to handle the staggered deployment of features (Dev -> CI -> Test -> Prod). We direct BTE to use updated/changed SmartAPI yamls.
Once …
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TRAPI 1.5 has [updated documentation for "references"](https://github.com/NCATSTranslator/ReasonerAPI/commit/b856d79c4df1fe2dbba937ddb339019958cb1150), that says "urls to an external page for the asso…
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As it stands, BTE is able to handle many simultaneous queries without any failures or going over time. However, some queries are prone to failure by timeout and may affect assessments of BTE's concurr…
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@newgene says that once the code freeze is over, the BioThings APIs will be updated to allow POST queries to use `post_filter`.
The initial issue is here: https://github.com/biothings/biothings.ap…
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From the timestamps in https://download.jensenlab.org/, it looks like the data underlying the DISEASES and TISSUES APIs are updated ~weekly. The current APIs have not been refreshed since Aug 2020 fo…