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Hello, First of all, thanks for the amazing work.
Question: I tried to train the Unet3D model on bratS 2018 dataset using the 'train_brats_2018_new.py'. but I got lower validation DSC and higher val…
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Hello Issam,
I have a problem when I execute the command: python3 extract_patches.py
Result:
Using TensorFlow backend.
iteration [0]
there is a problem here!!! the problem lies in this patien…
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Thanks for sharing the weights for the model trained using BraTs dataset. Is it possible to share the weights file for the model trained using CT images as well?
Thanks
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When I try to run auto segmentation using Slicer, it shows this error.
[2024-06-05 23:59:28,218] [27056] [MainThread] [ERROR] (uvicorn.error:434) - Exception in ASGI application
Traceback (most …
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### Preprocess code
First of all, I want to express my appreciation for the author's work and contribution. However, since the author didn't provide the preprocessing code for the dataset in the Gi…
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* Name of dataset: Brain Tumor Segmentation Data
* URL of dataset: [https://ieee-dataport.org/competitions/brats-miccai-brain-tumor-dataset]
* Citation: [1] B. H. Menze, A. Jakab, S. Bauer, J. Kalpa…
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How much memory are you using? I had a problem running f-Anogan with 60GB of memory on the server
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Hello! I would really appreciate your help. Thank you very much for the excellent work. I was trying to test the network mentioned in the title using 3UNet (python train_uncertainty_aware_mean_teacher…
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Thank you for sharing your research.
Currently, only the code for experiment/brats_2017 has been shared in the repository, could you please provide the code for the multi-organ CT segmentation dat…
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I am trying to **inference with command line**. I have run `nnUNet_predict -i -o -t -m 3d_fullres -tr nnUNetTrainerV2BraTSRegions_DA4_BN_BD --save_npz` successfully. However, there is something wro…