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Pull one patient from Synthea data (lung cancer, if available) and perform QA/QC by manually mapping to KBs/reference DBs. Look for biomarkers, relevant pathways, etc. Reference the [KB figure](https:…
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create new doc for new season
send calendar invite for biweekly Mentors Seaside Chats Aug 14 to Dec
link invite to Google doc
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Initial group info you provided:
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| Name | Department/Program | Expertise/Interests |GitHub ID |
| ------------- | ------------- | ------------- | ------------- |
| Samantha Sch…
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Are the mrna and CNVS used in your LGG,LUAD,KIRC experiments logarithmic or normalized? May I ask whether the network structure and network hyperparameters are consistent with the gbm experiment?
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For a few months, I've struggled with getting this method to work (first issues relating to getting geneset names that later resolved itself, and now issues with getting the actual genes in the genese…
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Planning next steps for inventions and innovations with respect to current patents and concepts new elements and molecular configurations including amino acids
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hi guys - i wrote down a long idea about graphing the state of research for individual rare cancers here: https://docs.google.com/document/d/1Wx6fMw4HRsTI0aww0HZ_Cmv0gnvE4HntY-phoIiyAKA/edit
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The page https://activedriverdb.org/protein/browse/ has a little too much information and should be compressed. I actually wonder if this type of a view is even necessary given that we have top 100 di…
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Try running the notebook for more queries for further testing. Examples:
1. Original example results from #538:
* Imatinib - [Gene] - [Gene] - Asthma: https://arax.ncats.io/api/arax/v1.3/respons…