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**Describe the bug**
perfusion derivatives crashes on linux
**To Reproduce**
captk PerfusionDerivatives -i $input -e 45 -p 1 -pH 1 -r 1 -o $outdir
**Expected behavior**
output 3 derivatives, …
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### Actual behavior
```Python
Traceback (most recent call last):
File "/opt/miniconda-latest/envs/mb/lib/python3.6/multiprocessing/process.py", line 258, in _bootstrap
self.run()
Fi…
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**Describe the bug**
The CaPTk 1.9.0 Linux installer fails.
**To Reproduce**
Download from NITRC.
Call the installed with `bash /path/to/installer` or chmod the installer to be executable an…
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Thanks a lot for the great contribution :-)
In the paper and in the code you specify the preprocessing pipeline. Is this also contained in the repository? The comments reference to test_raw.py but…
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I have tested your given models under the model17 directory on the validation data by submitting the segmentation results to the CBICA Image Processing Portal. However, I didn't get the same result yo…
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**Describe the bug**
I first saw this problem with a collaborator who is running this application.
**To Reproduce**
Steps to reproduce the behavior:
```bash
BraTSPipeline -u
```
Error message…
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To cbica-cluster and github repo https://github.com/hsieh42/ILD and/or Babak directly.
- [x] ILD_report_20180905.docx
- [ ] ILD_clustering_prediction_result_20180619.pptx in `ILD`
- [ ] ILD_clust…
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## ERROR
Processing dependencies for DeepMRSeg==0.1.0
Searching for tensorflow-addons
Reading https://pypi.org/simple/tensorflow-addons/
No local packages or working download links found for tenso…
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Some packages needed to be installed or downgraded to support the currently installed CUDA version on CUBIC.
Our current environment.yml file needs to be updated to reflect those requirements.
H…
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```bash
git clone https://github.com/CBICA/CaPTk.git
mkdir CaPTk_build ; cd CaPTk_build
cmake -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=./install_libs -Wno-dev ../CaPTk
make -j4 ..…