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homophilic cell adhesion via plasma membrane adhesion molecules
This sounds like a MF? (homophilic interactions = protein binding between identical proteins, as far as I understand it)
there are…
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https://doi.org/10.1109/BIBM.2016.7822593
> Enhancers are crucial to the understanding of mechanisms underlying gene transcriptional regulation. Although having been successfully applied in such pr…
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Hi, I found a bug in the tutorial for running imputation based on MERFISH dataset:
![image](https://github.com/YangLabHKUST/SpatialScope/assets/43333475/10caa389-5e55-4b71-acc5-3ef57c2b06f5)
Mor…
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Posting this to document the current state of the microalgae collections data:
We need to ask NEON for collector information.
We should not be traveling around the sample tree for preservative …
kyule updated
2 months ago
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Hi,
We are currently trying to use Vedo to figure out where a Point is positioned in a mesh. We identified the `find_cell` method, but it gives weird results. On the piece of code below we build a …
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```
I think we all agree that having a means to record markers used in FACS sorting
of cells is an important and useful. But there is an ongoing issue in CL with
species specificity and these axiom…
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Hi, using scCOMP for the first time; the issue I'm running into is that for some reason cell_group and sample calling are not working appropriately from a Seurat object when running scCOMP.
Here i…
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Corner case 1:
The IPynb below is made in VSCode. But once imported into Codepod,
1. all source code is gone.
2. HTML is not properly rendered.
![image](https://github.com/RunVas/RunVas/ass…
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Currently, squidpy focusses mostly on local [spatial neighborhoods ](https://squidpy.readthedocs.io/en/stable/notebooks/tutorials/tutorial_vizgen_mouse_liver.html#neighborhood-enrichment) for niche an…