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Simplified Molecular Input Line Entry Specification
Una paqueteria que permita descargar el formato SMILES de fármacos desde https://pubchem.ncbi.nlm.nih.gov/, a partir de una lista de ChemID (Chemi…
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There are a few failure modes:
1) the chemical is something without a structure... should probably bring in all the identifiers a la the mesh update and chebi
2) There is a inchi, but it isn't in un…
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Three examples from #360 (originally reported at https://github.com/TranslatorSRI/Babel/issues/333):
* MONDO:0007540 not cliqued with DOID:10017
* MONDO:0017169 not cliqued with DOID:3125
* MONDO:0…
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@EvanDietzMorris reported that a large number of HMDB identifiers are missing from cliques. I'll add the full list here for later testing.
Full list of reported missing HMDB identifiers
```
H…
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See https://github.com/biolink/biolink-model/issues/1156
We are saying Activity, @karafecho thinks ClinicalIntervention may be better. My guess is that this is being handled by the leftover UMLS h…
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From https://wiki.openphacts.org/index.php/SureChEMBL
> Compounds are assigned SureChEMBL identifiers as used in the SureChEMBL interface and download files. Please note these identifiers have no rel…
stain updated
8 years ago
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On the OPTIMADE call came up the idea of a `_cif_` prefix (which was previously suggested and at the time rejected in #143).
The idea is that any identifier `_x` defined in the CIF standard (https:…
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At the moment we choose a preferred label by following the label of the preferred prefix. Eg. if we're looking at a chemical, we take pubchem's label. But sometimes this leads to ugly names. Perhap…
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```
{
"title": "Aggregated Computational Toxicology Online Resource",
"notes": "This resource is a link to the ACToR (Aggregated Computational Toxicology Online Resource) website by EPA, where da…
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**Description**
Descriptors essentially explain a molecule's structure and prevent confusion between completely different molecules. Based on SashaSemenishchev comment from Feb 20 regarding the use…