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> Adding all the files of The COBRA Toolbox ... Done.
> Define CB map output... set to svg.
> TranslateSBML is installed and working properly.
> Configuring solver environment variables ...
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defaultSboTerm is not defined in line 496 of writeSBML function. It should be set as defaultSboTerm = 176
**I hereby confirm that I have:**
- [ ] Tried to solve the issue on my own
- [ ] Retrie…
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*Please include a short description of problem here*
I'm trying to figure out how to correctly load an excel file into and cobra model, so I checked the documentation here:
https://opencobra.github…
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Hello dear Community,
I've faced this error using MgPipe:
Error using createPersonalizedModel
Unable to perform assignment because the indices on the left side are not compatible with the size …
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*Please include a short description of problem here
how to get codes for creating a community model for probiotics. also how to simulate this in recon 3d using different diets
**I hereby confirm th…
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*Please include a short description of problem here*
how to get codes for developing community modelling of probiotics in MATLAB. also how to simulate this in recon 3d ?
**I hereby confirm that I ha…
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Error in the function 'prepareFastGapFill', it throws out the following error:
Error using load
Unable to read file 'KEGGMatrix'. No such file or directory.
Error in generateSUXComp (line 49)
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*Please include a short description of problem here*
Hello, I am using a COBRA model (.mat) from Palsson 2018 (https://bmcsystbiol.biomedcentral.com/articles/10.1186/s12918-018-0557-y), also it is …
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*Please include a short description of problem here*
Hi all, when I try to initialise the cobratoolbox on my desktop with "initCobraToolbox", my Matlab instance crashes. The following error was fou…
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findRxnsFromMets.m
The function aways give me either first rxn from the `model.rxn` or a list of rxn does not match input.
After I looking into the code, it seems that there might be some error in t…