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Hi,
I wondered for a while why ChaCha20-Poly1305 was selected by GA4GH for data encryption and the closest I could find were notes on fixed blocksize giving possibility to jump into middle of a str…
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Hello and thanks for providing this excellent implementation of htsget!
We are trying to use it together with a minio S3 storage and so far it worked well, however we noticed that when requesting a s…
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I applied hifiasm (v0.19.5-r592) to a HG002 30X dataset sequenced using PacBio Revio and got 2-3% switching error rate for primary contigs and two phased haplotypes contigs:
```bash
# switch/hammi…
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samtools 1.18
htslib-plugins: 201712
Running the following (which is from one of our test suites which passes on iRODS 4.2.7, 4.2.11 and 4.2.12) fails on the current 4.3.1 release of iRODS. This i…
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Add support for requesting genomic data in encrypted (crypt4gh) format.
Htsget (more specifically [htsget-rs](https://github.com/umccr/htsget-rs)) is supposed to support this functionality, as desc…
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#### Proposed solution
The UI should give a clear indication if the encryption key given as input can't be used. `ssh-ed25519` along with `crypt4gh-key` are the supported key types, so those are th…
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Hi, recently I have been trying to run IMSindel on human whole-genome sequencing short-reads but have been running into an error and the program terminates without any output. When I checked the log f…
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Dear EGA Team,
When trying to follow the EGA Live Outbox [guidelines](https://ega-archive.org/access/download/files/live-outbox/), FileZilla does not recognize the Crypt4GH private key (.sec).
`Th…
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* link to support ticket: [#2024061760001031](https://otrsdict.ugent.be/otrs/index.pl?Action=AgentTicketZoom;TicketID=159793)
* website: https://github.com/EGA-archive/ega-quickview + https://crypt4g…
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#### Are you using the latest version of [samtools](https://github.com/samtools/samtools/releases/latest) and [HTSlib](https://github.com/samtools/htslib/releases/latest)? If not, please specify.
(ru…