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One thought I just had is that, if a hub is set up with `NA` as a required and valid value for a task ID, this will cause false negatives when determining complete cases.
Do you think that migh…
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### Summary
Create a unified data model for disease knowledge. There is a wealth of information that can be associated with any disease: what phenotypes are manifested, the causative variants and t…
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This issues follows from considerations for modeling disease model associations in #506, and discussions with ZFIN and AGR on this topic. It concerns the broader issue that in Monarch data we create d…
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looking at this code: https://github.com/reichlab/idforecastutils/blob/b137497b0bbe8c59210dcecb37214ad133740d52/R/get_pmf_forecasts_from_quantile.R#L91-L120
It seems like we should be able to avoid…
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When scraping fairly large websites, we hit the token limit and receive the `GGML_ASSERT` error:
```
n_tokens_all
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**Background**
This is related to (and a pre-requisite for) Infectious-Disease-Modeling-Hubs/hubverse-transform#6
The [hubverse-transform repo ](https://github.com/Infectious-Disease-Modeling-Hubs/h…
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Values in a number of synthetic model output files contain decimals when they should all be integers (or atleast coercible to inegers without changing the values) e.g. https://github.com/Infectious-Di…
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https://arxiv.org/abs/1707.01623?context=q-bio
RIDDLE: Race and ethnicity Imputation from Disease history with Deep LEarning
Ji-Sung Kim, Andrey Rzhetsky
Anonymized electronic medical records…
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Currently, job configurations are generated fairly manually, particularly when jobs need to be resubmitted due to state exclusions or model prior changes. While we cannot automate this entire process …
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At a recent demo, @annakrystalli raised the good point of ensuring that Hubverse GitHub actions that interact with AWS are as secure as possible.
Anna specifically asked if there is a way to programm…