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This issue is part of an effort to reconcile the current [structural_variant database model](https://github.com/cBioPortal/cbioportal/blob/87e5a228d80a31515bf1a3e762bd2d70db89d2fb/db-scripts/src/main/…
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My apps already visualize music from external and internal music players. I want to add live microphone sync, so my apps also visualize sound from the microphone. How can I implement that? I found n…
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I am working with sequencing data that has short insert sizes but was sequenced with 150 bp paired-end reads, leading to high levels of overlaps within the read pairs. When I visualized the data align…
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TypeError: undefined is not an object (evaluating 'interaction.participants[i].segment.role = null')
[yeast_gates_network_example.zip](https://github.com/VisBOL/visbol-js/files/2550499/yeast_gates_…
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Hollis (@wrighth) is working on 3d visualization tooling for networks.
He is looking for potential datasets so Shannon McWeeney sent him our way.
Attached is an example of the format would needs the…
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Hi,
I have a question about your algorithm usage.
Your algorithm is a signal-based approach. When you translate the genomic region of interest into the expected signals by the k-mer pore model,…
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Hi Alex
I run a trial test and found an error as below:
Command
python3.7 CRISPRloci_standalone.py -f NC_005230.fasta -output NC_005230.fasta.dir -st dna -cpu 32
Final output
summary crispr Examp…
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1. [Integrating ChIP-seq with other functional genomics data](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5888983/pdf/ely002.pdf)
2. [2014-nature review-Identifying and mitigating bias in next-gener…
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Dear Lex,
I think your vizualisation about the development in high throughput sequencing is great!
And like so many people I'd love to add it to the intro of my PhD thesis.
Nonetheless, it is …
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Often you want to look at vectors over the vocabulary (eg the logits at a specific position). This is >50,000 dimensions and this is hard to interpret! I want there to be nice utils to visualize a vec…