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igvteam
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igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
https://igv.org
MIT License
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Losing labels when zoom in/out
#1592
felipefahrion
opened
10 hours ago
3
Export the report for SNP list, base, depth of coverage from IGV
#1591
Szuchieh17
closed
11 hours ago
3
Fix issue1512
#1590
kunmonster
opened
1 day ago
0
Genome improvements
#1589
jrobinso
closed
5 days ago
0
fix the issue 1512
#1588
kunmonster
closed
3 days ago
26
Relative local file paths do now work in genome.json
#1587
jrobinso
opened
6 days ago
1
Fix for 2bit reference crash when reading the end of the reference
#1586
lbergelson
closed
1 week ago
0
visualize Hi-C contact matrix
#1585
BenxiaHu
closed
1 week ago
1
"Error repainting view" Issue loading reference.
#1583
Jfen101
closed
1 week ago
2
copy sequence does not work
#1582
BenxiaHu
closed
1 week ago
4
Issue with viewer window.
#1581
The-X-Monk
closed
1 week ago
0
Correct rendered range of symbolic VCF alleles
#1580
ctsa
closed
6 days ago
2
Gzipped files get cutoff when loading from google cloud
#1579
lbergelson
opened
1 week ago
1
Urgent Assistance Needed for App Launch Issue
#1578
kryptonic963
opened
1 week ago
3
macOS Silicon Release
#1577
aidan-gibson
opened
1 week ago
0
Alignment tracks are incorrectly grouped above the coverage tracks
#1576
minw2828
closed
1 week ago
7
Right-Click mode
#1575
minw2828
closed
1 week ago
5
"infinite" coverage in base modification alignments
#1574
SamieJaffreyLab
closed
1 week ago
3
Error when loading CRAM file with alignments to MT when reference NC_012920 is loaded
#1573
Schmytzi
opened
1 week ago
7
"View chimeric alignments in split screen" feature not aligning properly
#1572
ryan-moreno
opened
1 week ago
2
Remove snappy
#1571
lbergelson
closed
5 days ago
2
Replace compiled shell script launcher with "c" program launcher
#1570
jrobinso
closed
2 weeks ago
0
Update to Java 21 and gradle 8.10.1
#1568
lbergelson
closed
2 weeks ago
1
BAM files not loading in local IGV on Linux
#1567
aboyd003
closed
3 weeks ago
13
Add basemod colors for 3 chebi codes. See #1563
#1566
jrobinso
closed
3 weeks ago
0
How to view 'linked read' in IGV?
#1565
kuangzhuoran
closed
3 weeks ago
5
Improve behavior of the Hide small indels menu option
#1564
lbergelson
closed
3 weeks ago
0
Support for coloring of ChEBI Modified Base Codes
#1563
marcus1487
opened
3 weeks ago
5
Delete unused Apache Tomcat Utils package
#1562
lbergelson
closed
3 weeks ago
1
Error while querying reads in gnome terminal
#1561
aamahale
opened
3 weeks ago
4
GRCh37/hg19 alias missing chr23
#1560
MayTheForestBeWithYou
closed
3 weeks ago
12
Google Cloud OAuth Failed
#1559
iimpulse
closed
4 weeks ago
1
Support for Stranded RNA-seq Data Using BAM File Tags
#1558
rLannes
closed
3 weeks ago
15
Could not connect to the genome server from Chinese mainland
#1557
cyk64
closed
4 weeks ago
4
Access forbidden when trying to load T2T CHM13-v1.1 and T2T CHM13-v2.0/hs1
#1556
cheehongsg
closed
4 weeks ago
13
Feature request: generating HGVS compliant nomenclature for a selected variant
#1555
dsonkin
opened
4 weeks ago
3
Discrepancy Between IGV and pysam Reads Statistics for Specific Genomic Position
#1554
chaopower-zhang
closed
4 weeks ago
0
Genome loading refactor to recover gracefully on startup errors
#1553
jrobinso
closed
3 weeks ago
0
Error Message after installing 2.18 version in windows. Error "Cannot invoke 'Java.io.bufferedreader.close()' because reader is null"
#1552
Jeevankumar404346
opened
1 month ago
6
question: increase visibility of SNPs at wider views?
#1551
kevfengler227
opened
1 month ago
24
"Read Order" is wrong in "Supplementary Reads Diagram"
#1550
simondrue
closed
1 month ago
2
Make IGV session file
#1549
diego-rt
closed
1 month ago
2
Cigar string doesn't match IGV read visualization
#1548
tanyasarkjain
opened
1 month ago
3
Feature Request: Recently opened files
#1547
jonn-smith
opened
1 month ago
0
SpliceJunction tracks now honor manual color setttings
#1546
lbergelson
closed
1 month ago
0
Incorrect parsing of MM/ML tags with no "." or "?"
#1545
Shians
closed
1 month ago
4
Update dependencies to fix vulnerabilities
#1544
lbergelson
closed
1 month ago
0
Move the amazon credentials check at startup into an async thread
#1543
lbergelson
closed
1 month ago
6
Adding additional options for duplicate reads.
#1542
lbergelson
closed
1 month ago
4
RefSeq transcripts: only one appears in the pop-up list when in collapsed mode (from IGV 2.17.x)
#1541
jrobinso
closed
1 month ago
0
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