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When using the command line with normal `input` and `output` options and independent of the `--format` option, setting `gui=false` returns the following error:
```
com.fasterxml.jackson.core.JsonPar…
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I want to ask for the javasprict ,I will appreciate that anyone can help me !
wpg13 updated
3 months ago
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Hello everyone,
I am new to Escher converter and I was wondering if :
First, convert directly ,using a python code, a SBML file (containing a model at a genome scale) into a Json file in order to ex…
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I was testing escher, using the documentation form here: https://escherauth.io/escher-js.html
The documentation is wrong, because if I add the 'X-Escher-Date' header, it'll be in a wrong format, and …
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Hi,
So I am attempting to do FBA using a python code on Jupyter notebook. I have built my own metabolic map using esher but have run into issues when trying to input this map within the code as I ca…
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Thanks a lot Shashi for the great work on Escher. I am trying to embed plots from PlotlyJS.jl inside Escher without any success. Is there a way to embed self contained `html` inside a tile?
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Hello everybody. I am using ESCHER on my jupyter nootebook. As somebody already asked: Is there a simple way to draw every reaction encoded within the .json and have it auto-spread? Or do I have do se…
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Trying rule 2 example 1 from https://shashi.github.io/Escher.jl/ gives error in padding. Seems to apply to all calls of `pad`. Escher 0.1.0
Error:
`'pad_outer' has no method matching pad_outer(::Meas…
njc46 updated
6 years ago
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The idea is to make individual Escher maps for the different KEGG pathway maps. Which ones do we want to make Escher maps for, and is there a prioritization within that?
The list of all the availab…
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This should include:
- [ ] Interop with COBRA toolbox map txt file
- [ ] Generating Escher maps, Escher-compatible datasets, and JSON models directly from COBRA toolbox
If any COBRA toolbox users are…