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Hi,
would like to ask whether Agent.jl plans to support continuous-event/-time agent based modeling in the near future?
Or is it already supported?
Thanks a lot in advance!
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To accurately account for channel noise requires considering Markov models of ionic channels (there's a paper showing that Langevin approximations are not good enough). The standard method is describe…
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- [x] Implement a base solver class that the application will use to run the model.
- [x] Code will need to call propensity and stoichiometry functions and update the compartment values.
- [x] Outpu…
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@jstac @thomassargent30 @ChrisRackauckas
Starting with the python version as a reference: https://python.quantecon.org/sir_model.html
My thought is that there could be two lectures here:
- `M…
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Thanks a lot for this very useful module!
I have started working with it and I was wondering if you could possibly help me deciding which simulation function is the best for what I want to do. I ha…
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Based on a great idea from @eagmon: As a first pass at removing the partitioning logic, we can simply modify the code on the state-side such that a process sees the full simulation state, rather than …
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I've noticed that under certain conditions, `StochasticSystem.evolve()` can produce negative counts which should not be possible if I'm not mistaken. I've pushed a branch (`neg-counts`) which has a s…
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I found a source of freely-available textbooks that are not indexed in OpenLibrary. This issue is to consider including their corpus in Open Library. Actually a short web search brings up several sit…
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I think the simulation of ClassicDSD has rounding / precision issues.
When does the issue arise?
When simulation CRN in ClassicDSD where the rate constants are numbers with very different magnitud…
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Currently, to make a GIllespie simulation, I first make a `DiscreteProblem`, and then a `JumpProblem`, and then simulate it. For almost all other types of simulations, I just make a single problem. I …