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The source file we are consuming is here: [https:/data.glygen.org/ln2downloads/biomarkerdb/current/allbiomarkers-all.csv](https:/data.glygen.org/ln2downloads/biomarkerdb/current/allbiomarkers-all.csv…
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Selecting Applicants to Interview
This summer, we will have 4 interns, 2 Bioinformatics and 2 Data Wrangling. We plan on interviewing 10 applicants in total.
- Initial Screening:
- - Receiv…
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It seems that there's many S:S31del lineages emerge now. This deletion was in previous variants but rather rare, however under BA.2.86* it seems much frequent.
A very interesting fact is that this…
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I've been struggling to make use of custom motifs. Having looked at the code I suspect it might not work for other functions than annotate_dataset(). For example, get_heatmap() does not pass custom_mo…
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Nucleotide search: G28028C, G28395A, G28509A (alternative query : C6285T, C4596A,T17088C edited)
EPI_ISL_18839074
nuc unique T3730C, C4596A, A7429G, T16002C, T17088C, G17706A, T21015C, G21606T, C2…
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貼吧活動:(請查閱 [SARS-CoV-2 Timeline by 2020.02.21](https://github.com/agorahub/_meta/blob/agoran/theagora/sari/Memorandum_2020-02-21_SARS-CoV-2-Timeline_Nathan.pdf?raw=true), by Nathan :cloud: )
- Colla…
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@JingyueWu and @rajamazumder will talk and plan if there is something to discuss in the group meeting.
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Dear gapseq team,
I have been exploring starch/oligosaccharides degradation reactions present in my models and have noticed that certain reactions are labeled as 'good_blast' in the *Reactions.tbl …
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- Critical Announcements
- E…
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Good day everyone.
9 new sequences of a BA.2 strain were detected. Samples were collected between September and November 2023 from Gauteng, Mpumalanga and Limpopo, South Africa. NextClade assigns …