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I'm using this package for calculating representative periods for my research. As I need chronological clustering for one aspect, I was wondering, if you think a connectivity like this one:
> c…
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How to use hierarchical clustering index in C? It would be helpful if someone could give a sample code.
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- [ ] Parallelise `result_clustering` function to multiprocessor
- [ ] Highly test feature before release (from too small to too large simulations)
- [ ] Check other candidate functions for parallel…
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I am trying to use RAPTOR hierarchical clustering with Colbertv2 but I need to extract the embeddings generated by the model for the clustering step which involve a Gaussian Mixture Model.
How do …
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For the distance sparse matrix obtained by TCRDist, I tried to reduce the dimension first and then cluster. For dimensionality reduction, I used the TruncatedSVD method, which first reduced the origin…
KIEwx updated
5 months ago
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Before I say anything I am impressed by the dedication into the modules you guys are creating.
ML in JavaScript is in it's infancy it seems as there are no libraries that provide agglomerative hierar…
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We are very impressed with the scalability of scanpy. We are interested in performing gene co-expression clustering on large single-cell RNAseq datasets. This typically involves calculating pairwise c…
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There is currently no documentation explaining the distance and linkage options for clustering...
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http://danifold.net/fastcluster.html
Should probably be as simple as calling the hclust from this package rather than stats.