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Hi @viklund and all contributors,
Thanks for this amazing workflow and I found it very useful! I was wondering if there is a way to use it more efficiently.
For example, I already have bam files…
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This sequence (trivial modification of `testrd_par.c`):
```
exoid = ex_open_par("test.exo", /* filename path */
EX_READ, /* access mode = READ */
…
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In the container
The rsem aggregation step failed to extract the proper sample ids when sample names contained character `.`, and may even crashed (error message shown below) when the partially extr…
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The get_sqe() call in this specific case could fail if no elements are available in the submission ring:
https://github.com/mochi-hpc/mochi-abt-io/blob/main/src/abt-io.c#L2305
In that case, the …
carns updated
7 months ago
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I had this bit written up for the docs on the EESSI test suite, but neither of these options doesn't seem to work as intended with our GROMACS/TensorFlow tests:
``````markdown
#### Filtering by de…
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Using the [tutorial on the LBPM page](https://catalog.ngc.nvidia.com/orgs/hpc/containers/lbpm) on RHEL 8, all of the wget comments to build the Singularity container fail with:
```
wget https://gi…
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DL benchmarks could also get executed within HPC environments.
Often singularity is the container engine used within HPC therefore singularity should be supported.
https://sylabs.io/singularity/
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## Description
Prepend of `log_opt.sql` location is failing, resulting in a IO FileNotFound error.
### Steps to reproduce issue
_Please provide a minimum working example (MWE) if possible_
1…
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https://singularity-hpc.readthedocs.io/en/latest/getting_started/user-guide.html
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After moving to version 2.5.1 I am now getting following build errors related to protobuf. I've built protobuf-3.1.0 and successfully built version 2.4 with the same version of protobuf.
building /…