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I cannot install the software based on README file:
Here is my command used:
```
cargo install --path .
```
Error message:
```
(cargo) [yliu8962@d05-10 modkit]$ cargo install --path .
…
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In light of #87 and recent work on cfDNA internucleosomal methylation, does it make sense to have a feature in modkit that samples a position-dependent methylation calling threshold?
If something l…
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Hello. Thank you for creating this useful tool! I called mC and hmC bases, aligned the .bam files, sorted and indexed, and then created bed files. Then I wanted to perform modkit dmr pair on my two sa…
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Hi,
I am interested in context specific methylation events and I am seeing some strange association between the predicted percentage of modification and the coverage at a given site. I followed the…
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_From @Phlo123 on January 29, 2018 22:6_
Script to create copies of a material on runtime, please! I would do it but I don't know the wae 😛
Edit: i don't know how to assign people to this so... @…
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* Current modders are in a legal grey area because we haven't explicitly listed what is allowed
* Source headers in mods folder directly say they are copyright Strange Loop Games, but don't mention a…
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Hi everyone,
I ran some samples using an updated Dorado model and I'm getting different thresholds from Modkit for the same sample. In my case, I have a lower calling threshold compared to, for examp…
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Hi @ArtRand,
I got this error when running a command that works on many of my other samples on `v0.4.1`:
```
thread '' panicked at src/genome_positions.rs:100:16:
range end index 110770 out of r…
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Hi,
I am attempting to integrate the methylation percentage data obtained from pileup discussed in #129 with the data on read_position from modkit extract. Applying polars code does not yield results…
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I'm trying to filter a bam to clamp mod-A to either 0 (canonical) or 100 (modified) so that I can view it in Jbrowse2 showing similar percentages as I am seeing when I summarize the bedmethyl made wit…