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nanoporetech
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dorado
Oxford Nanopore's Basecaller
https://nanoporetech.com/
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Is there a way to filter the modified bam based on q score?
#916
yinyuanmtu
opened
17 hours ago
0
Only mentioned reads in the output in Dorrado correct
#915
arslan9732
opened
22 hours ago
1
run multi model dorado with no internet connection
#914
gambalab
opened
1 day ago
0
Request - Accessible progression information for cluster users
#913
TristanLefebure
opened
1 day ago
0
Basecalling for lower spec GPU, v5 model segmentation fault
#912
aringeri
opened
2 days ago
3
Additional poly(A) feature tags
#911
nemitheasura
opened
2 days ago
0
doubly ligated barcodes trimming
#910
jonkristoffersen
opened
2 days ago
0
Question on using dorado trim for barcode removal
#909
sachiwije
closed
3 days ago
4
Does dorado demux support duplex calls?
#908
MostafaYA
opened
4 days ago
1
Dorado correct killed without explanation
#907
JasonJWilliamsNY
closed
3 days ago
2
Restrict fastq output of demux to only samples included in the sample sheet
#906
MostafaYA
opened
5 days ago
1
Megabase reads in v5 models
#905
diego-rt
opened
6 days ago
3
Rapid adapter trimming
#904
diego-rt
opened
6 days ago
1
Fine tuning Poly A tail estimation in plasmids with interrupted polyA tail
#903
RunningMatcha
opened
1 week ago
1
Dorado Aligner Producing Unexpected Behavior
#902
VBHerrenC
closed
1 week ago
4
Load reads from file - takes longer than expected
#901
phpeters
opened
1 week ago
3
barcoding creates empty files. Dorado 0.7.1
#900
vilnis01
closed
1 week ago
1
How to use the barcode classification option
#899
Narmatha99
closed
4 days ago
5
Dorado basecall identified barcode but not trimmed in demux
#898
alexyfyf
opened
1 week ago
3
Dorado error
#897
weishwu
opened
1 week ago
1
How much better is `dorado correct` in 0.7.2 than 0.7.0?
#896
sivico26
closed
1 week ago
2
Issue installing Dorado
#895
Narmatha99
closed
1 week ago
4
Bases modified duplex basecalling
#894
angelluigi
closed
1 week ago
4
Increased system RAM usage with dorado 0.7.1 & v5.0.0 models
#893
samuelmontgomery
opened
1 week ago
2
Comment: Simple conda solution for path variable.
#892
Artifice120
closed
1 week ago
0
"dorado correct" failed to stop running
#891
yzhang-github-pub
opened
1 week ago
2
dorado correct output
#890
katiecdillon
opened
1 week ago
1
Whether reads are trimmed adapters when running dorado duplex
#889
hungweichen0327
closed
1 week ago
1
How to monitor the progress of the `dorado correct` and predict the rest time
#888
hungweichen0327
opened
1 week ago
0
Re-basecalling causing Q-scores to significantly drop
#887
lilif99
closed
1 week ago
2
Unable to run dorado basecaller with CPU.
#886
VBHarrisN
closed
1 week ago
2
Dorado "Failed to determine sequencing chemistry from data. Please select a model by path"
#885
legoscientist
closed
1 week ago
6
No more alignement in output bam with dorado basecaller --reference option in v0.7.0
#884
RxLoutre
closed
23 hours ago
13
Dorado correct performance?
#883
tnn111
opened
2 weeks ago
1
Question regarding the new dna_r10.4.1_e8.2_400bps_sup@v5.0.0 Model
#882
AzlanNI
opened
2 weeks ago
1
additional output for dorado summary
#881
smaegol
opened
2 weeks ago
0
Pod5 files corrupted?
#880
mbacino
closed
2 weeks ago
4
`[error] basic_string::substr: __pos` error with duplex basecalling
#879
diego-rt
closed
2 weeks ago
1
Double demultiplexing for pcr barcoded samples
#878
luigallucci
opened
2 weeks ago
2
Duplex and simplex read numbers do not correspond
#877
stas-malavin
closed
2 weeks ago
2
Minor: Argument parsing with the --modified-bases parameter
#876
rfran010
opened
2 weeks ago
1
Memory assignment issues
#875
mattloose
opened
2 weeks ago
0
Wrong values in sm & sd SAM tags
#874
vadanamu
closed
1 week ago
3
Size of tensor a not matching size of tensor b - Direct RNA (SQK-RNA004) basecalling
#873
NStrowbridge
closed
3 weeks ago
3
barcoding_summary.txt issue
#872
SalvadorGJ
opened
3 weeks ago
1
The sequencing_telemetry.js file is not generated by Dorado
#871
jourdren
opened
3 weeks ago
2
Missing fields in sequencing_summary.txt generated by Dorado vs sequencing_summary.txt generated with MinKNOW
#870
jourdren
opened
3 weeks ago
0
rna001 kit support
#869
ssscj
closed
3 weeks ago
1
Modification calling missing for the inter-chromosomal translocated reads
#868
DexinYang1998
opened
3 weeks ago
8
Question about pseU calling model rna004_130bps_sup@v5.0.0_pseU@v1
#867
AnWiercze
opened
3 weeks ago
3
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