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@thsa When I create a molecule from IDCode using `IDCodeParser(true);` and I generate a molfile, the molfile does not contains atom coordinates.
It seems to me that the main difference between tru…
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![image](https://cloud.githubusercontent.com/assets/1484241/23134781/53f1b296-f796-11e6-8d2e-5557be92e482.png)
[2.mol.zip](https://github.com/cheminfo/jsme/files/788094/2.mol.zip)
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**Environment details (please complete the following information):**
- Indigo Toolkit Version 1.18.0-rc.4.0-g84a1f903f-x86_64-linux-gnu-11.2.1
- Ketcher Version 2.18.0-rc.2 Build at 2024-01-17; 1…
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How can I assign the initial value of MDL Molfile V2000 through the catcher instance?
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```
It would be good to use the VMD molfile plugin for file formats, for which we
don't have a native reader.
http://www.ks.uiuc.edu/Research/vmd/plugins/molfile/
The user will have to install the …
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We need to find a way to display a 3D model of the molecule in order to measure some distances. This is very practical to check for expected NOE effects
Projects to check:
- https://github.com/Aut…
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```
It would be good to use the VMD molfile plugin for file formats, for which we
don't have a native reader.
http://www.ks.uiuc.edu/Research/vmd/plugins/molfile/
The user will have to install the …
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**Steps to Reproduce**
Request on `/indigo/validate`
```
{
"data": {
"type": "validation",
"attributes": {
"compound": {
"structure": "C(#N)C1C(Cl)=C(Cl)C(O)=C(C(O)=N)C…
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```
It would be good to use the VMD molfile plugin for file formats, for which we
don't have a native reader.
http://www.ks.uiuc.edu/Research/vmd/plugins/molfile/
The user will have to install the …
-
**Steps to reproduce:**
1. Call 'clean up' method for any reaction
**Expected result:**
Position of structure is not changed.
**Actual result:**
Position of structure has been updated.