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## The problem
TreeTime has currently a very rudimentary way of resolving polytomies (multi-furcations in the tree).
When this was initially put in place it was never meant to resolve large polyt…
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Really I want contribute for a Spanish version of this awesome application
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Idea: Develop translations to advance system understanding on the global information, transmission, and environmental cycles linked to spatially distributed human behavior and organized mitigation, an…
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It would be really useful to support translations to other languages.
https://react.i18next.com/ is a reasonable option given the current tech stack
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Is it possible to obtain the paths as _directed_ walks through the graph in GFAv1 format?
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As several countries ramp up for massive vaccination campaigns it seems important to account for that in the model predictions especially when looking several months ahead.
I guess a most basic imple…
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Hello,
On the roary website it mentions that panx can be used to visualize the data. I'm trying to load data into panx like the panx website says but the roary output is not recognized. I'm follo…
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For: Kaytie Innamorati @innamoratika
**Goal:** We want to show related individuals and blocks of individuals for viral sequences. We should be equivalent or harness information on nextstrain.org. …
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I'm running this code and run into an index error:
treetime --tree /Users/ouotodou/Desktop/treeee.nex --dates /Users/ouotodou/Desktop/sampled_metadata.csv --aln /Users/ouotodou/Desktop/sampled_seq…