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Thanks for developing this method. I've run into a potential bug where Ne estimates are different depending on the input file. I'm happy to share example files if that is helpful.
In short, given t…
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Hi Min Cheol,
I want to do an analysis in which cells come from multiple donors and I would like to perform differential gene expression analysis in a non-pseudobulked format. I do not have SNP inf…
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Hello,
I am trying to run pore-c on an HPC with this configuration:
srun -t 5:00:00 -p interact -N 1 -n 4 --x11=first --pty /bin/bash
But I get the Error executing process > 'POREC:pairsToCo…
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Develop a new proxy system that allows map authors to add extra feature annotations, which will be passed along and made accessible in the map viewer.
This will add a `proxy_features.json` file in …
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Dear author, I have read the article your team published in nature genetics. It's a really good study! Thank you for writing this detailed tutorial, which was very helpful for me to learn how to analy…
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### Version
3.82.6
### Trace Output
NOT APPLICABLE
### Expected Behavior
S3 Secret Keys that are defined in a JSON file as a KV pair S3_SECRET_KEY: verysecret are recognized. The correspondin…
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Good evening,
`ngsPool` provides `poolSFS.R`, a script which estimates a one dimensional SFS from the `SAF.GZ` output file. Is it possible for other software to read pairs of "sample allele frequen…
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Calibre-Web supports key/value pairs "Identifiers" and "Tags". Both are visible in the standard "Edit Metadata" web interface (screenshot below) for any book or video. To enable real-world uses, le…
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Adding tabs to the IDE would be so helpful.
I've made a fork with all of this including importing scripts from files now create a new tab with the correct name.
Example of how it'd look: [https://…
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**Describe the bug**
I am trying to run CellChat and I am getting a AttributeError: 'SparseCSRView' object has no attribute 'A'.
**To Reproduce**
Here is the code to call the method. The "adata…