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**Which problem would you like to address? Please describe.**
The CellML team is about to implement support for parameter estimation in OpenCor, and originally investigated PETab as the format to use…
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Using the composite problem method returns the following error:
AttributeError: 'CompositeProblem' object has no attribute 'extensions_config'
Suggestions?
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**Which problem would you like to address? Please describe.**
Currently, PEtab does not allow to express nonlinear mixed effects models (i.e containing fixed (population) and random (patient-specific…
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It would be useful to have a good interface for recording the path of all evaluated `u`s and their fitness values. I have tried to make this happen, but it requires hacky solutions (e.g. creating a cu…
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The following tests fail in MATAB R2021a (on macOS 11.3):
- DallaMan2007_GlucoseInsulinSystem
- TurboSplines
- State_Reduction
- Fast_Equilibration
- Boehm_JProteomeRes2014
- PEtab_Tests
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It would be neat if one could integrate PEtab select's feature for model selection with models declared in Catalyst (similar as was done for normal PEtab models).
I am not fully familiar with PEtab…
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@matthiaskoenig and others have suggested we make our tables more [normalized](https://en.wikipedia.org/wiki/Database_normalization).
Instead of a timecourses table (#581), I would suggest an exper…
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I have the following model:
model
```julia
using ModelingToolkit
using ModelingToolkitStandardLibrary.Blocks
using DataInterpolations
using OrdinaryDiffEq
using DataFrames
using PEtab
…
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I have no issue when forking and running your code, but for some reason, I cannot add your package into an empty environment.
I get the following error:
```
ERROR: LoadError: MethodError: no method…
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related: #16 #540
If you are already familiar with this, you could skip straight to the "Feedback" section and share your thoughts.
A couple of (currently unofficial) PEtab extensions have been …