-
MGI curators were delighted to see the Annotation Preview at our weekly meeting yesterday, and very impressed with how fast it is!
There are a couple additional sets of IDs that would be really he…
-
```
We should have a way to represent Protein Ambiguity Groups in mzTab. My
suggestions is that we can add an optional columns with the CVterm MS:1001591
which is the anchor protein. If we use this …
-
This would vastly reduce the number of ChEBI terms to choose from, and would make sure we use the 7.3 forms.
Thanks, Pascale
@kltm
-
For the alignment, it is desired that we have sequences for all eligible terms, and that these sequences reflect certain modifications to sequence such as removed signal peptides. Such information is …
-
The current `Modification` object is a simple class that contains mainly the unimod ID, the composition and the avg/mono mass of the modification as integer/double vectors of length 1. Additionally it…
sgibb updated
6 years ago
-
Hey,
Maybe this is a more general question about the somalogic platform but I encountered it while analyzing the data with somadataIO.
I noticed that some "seqId" correspond to multiple uniprot id…
adder updated
3 months ago
-
Add remainder mouse annotation file from uniprot upstreams to MGI data stream.
Listed as:
ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/MOUSE/goa_mouse.gaf.gz
ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/…
kltm updated
5 months ago
-
**Please describe your question, idea, or concern.**
I wanted to do some Noctua curation using modified PRO forms, but these were not available for PomBAse because they are not currently in our GPI…
-
https://github.com/PNNL-Comp-Mass-Spec/TopPICR/blob/7d3b20e9de26c938529f88d65ae5e0e1660d18ec/R/create_metadata.R#L73C58-L73C58
-
![image](https://github.com/SomaLogic/SomaDataIO/assets/155685991/9112dede-70e0-4b0b-87b5-d7b41b2f7e05)
## Description
When I ran a t-test on my Somascan data comparing sex and tried to visualise …