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Study folder: [syn3219045](https://www.synapse.org/#!Synapse:syn3219045)
We can expand these checks to be more specific, or mark them off/remove them if they are not relevant.
**Folder Structur…
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This issue was created in response to a sub-thread in #312, excerpted below. The goal of the issue is to identify cases of hard-to-name variants and potential solutions.
[@aws wrote](https://github.c…
reece updated
9 years ago
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Laurent, do you know what governs the choice of number for the acquisitionNum in the mzR header()?
As some of the native ID formats contains multiple integer values this is important to ensure correc…
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We need to scope tasks and capacities to integrate the baseline expression data into the Platform.
@tskir and myself will initiate discussions this week and will populate/assign this ticket according…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/lisiarend/PRONE
Confirm the following by editing …
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Hi there, very nice and useful repo!
I am wondering about the way sigma is computed for the data imputation (lines 176-178 in limma_main.R):
```
width
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I would like to just replace any missing values with 0 when using the impute() function. Can this be done with the below code? The function reference page does not specify this.
```{r}
imputed_MLE…
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# Design (@brianraymor)
## obs
...
### modality
Key
modality
Annotator
Curator MUST annotate.
Value
categorical wit…
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CONSERVED UNKNOWN CHANGES
410
Although these were in "conserved unknown" they had an existing process annotation and so they were not in the Open Biology unknown list:
- [x] SPBC9B6.03 endosomal …
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This may not be up to date as I'm using some of the synapse data generated last week but I'm just trying to get ahead of a few fixes.
- BeatAML mutations file has a column titled "mutations" instea…