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Hi,
`derfinderPlot::plotCluster()` is currently failing https://bioconductor.org/checkResults/release/bioc-LATEST/derfinderPlot/nebbiolo2-buildsrc.html and I traced it back to `ggbio`. Here's a sma…
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The integrated terminal uses the defaults from the current system preferences (in my case, my .bashrc). This is great, but it does not fit to the background color coming from the RStudio color theme.
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ghost updated
2 years ago
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Hello, while the theme looks amazing, it turns all options text into white color on white background.
Here is the screenshot:
 noticed that the following code from OSCA returns different t-SNE plots. Eventually we narrowed down the issue to BioC 3.11 vs 3.12 (3.13 is the same as …
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Hi,
In my case, I ran into another error using the files from https://github.com/LieberInstitute/spatialLIBD/tree/RELEASE_3_14.
```bash
Rscript -e 'rmarkdown::render("spatialLIBD/vignettes/T…
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## Description of the issue
The function _"recount::getTPM(rse)"_ returns the unexpected error message: _'Error: subscript contains invalid names'_.
Below, is a reproducible example that I have…
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- os: Kubuntu 23.10
- `lsd --version`: lsd 1.1.2
- `echo $TERM`: xterm-256color
- `echo $LS_COLORS`: *.7z=38;5;40:*.WARC=38;5;40:*.a=38;5;40:*.arj=38;5;40:*.br=38;5;40:*.bz2=38;5;40:*.cpio=38;5;40:…
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**Current Behavior (bug)**
Calling `devbox shell` should properly load the shell environment as documented. Packages and script should be available as well as the init hook should run.
**Expected …
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## Prerequisites
- [x ] I have searched for similar issues in both open and closed tickets and cannot find a duplicate.
- [ x] The issue still exists against the latest stable version of Element…
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**If you are experiencing this issue, consider the workaround described below in comment https://github.com/rstudio/rstudio/issues/13007#issuecomment-2221210496.**
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### System details
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