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SLURM can automatically requeue jobs (e.g. on node failure or preemption of a higher priority job: https://slurm.schedmd.com/sbatch.html#OPT_requeue). In general this is similar to the resume function…
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### Bug description
[This assertion](https://github.com/Lightning-AI/pytorch-lightning/blob/a6562b4ae7623acb87f35d49216f90aae2363b18/src/lightning/fabric/plugins/environments/slurm.py#L220) raises …
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Using toil from within cactus and a slurm scheduled.
I have 10 nodes available to me and each of them has 40 cores and 500Gb RAM. If I submit 100 jobs, TOIL will submit the jobs to 3 nodes. In my pa…
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Hello all,
I seem to be running into a strange error when trying to submit the virtual screening to SLURM and was wondering if anyone else has encountered this before has any recommendations.
![ima…
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The following infinite loop is probably due to a job disappearing from squeue before it is identified as completed in Fractal.
```
2024-07-24 07:59:02,287 - fractal_server.app.runner.executors.s…
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I put the system with 70 atoms ,336 electrons via using implicit solvation model GBSA in acetonitrile solvent conformational search with the following Slurm job script.
#!/bin/sh
#SBATCH --job-name…
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If I have more tasks than 1k, datatrove splits it into multiple job arrays 1k-each.
the first job array of 1k runs fine, the subsequent ones all fail
```
0: 2024-07-04 23:59:34.496 | ERROR |…
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We notice that in the `Jobs` -> `Active jobs` tab there are duplicate jobs per cluster as both have the same slurm configuration and slurm is configured with a single cluster:
```sh
$ _cpu1r
$ sa…
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### Discussed in https://github.com/apache/airflow/discussions/39597
Originally posted by **bejota** May 13, 2024
Hello,
I'm using HttpSensor to poll SLURM's REST API for job status. I'm usin…
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Would it be possible and sensefull to change the slurm job names to something more telling (for us humans)
e.g. keep the current name (I suppose they are a hash assigned by snakemake) and add in fron…