-
Reposting this from my question on the neuropixels slack channel:
I have been using SpikeInterface 0.101 to sort npx 2.0 data (KS4) with the run_sorter_by_property function.
I get noise waveforms wh…
-
@jsiegle A couple questions about what you have in mind for the raw data visualization.
Is there a good example dataset (not too long duration) that we could use during development?
Do we want t…
-
## Process
Using a sql command, I fetched tables with no rows, as recorded in the info schema. Some weren't actually empty, so I narrowed down the list by fetching with dj, and then looked for whic…
-
### Describe the issue:
After I installed Kilosort without GUI in Python 3.10 environment, I found the deprecation warning as shown in the title. I found this might be a potential problem.
To sol…
-
Hi, I am now focusing on "w2 = sw.plot_sorting_summary(we_KS2, display=False, curation=True, backend="sortingview")",I want to know which unit uses which color when plotting. I also add some print se…
-
Hello,
I saw an old issue about this topic, but I could not find a recent solution.
I am using a Linux machine, Python version 3.12.4. I created my environment and I installed matplotlib by using …
-
Hi @yger,
I have a question about the clustering process in spyking circus. I noticed that sometimes when I run the sorter on small periods of data or channels with a few peaks I get the following …
-
Not having luck with any of the viewers at the moment :/
When I type:
w = si.plot_sorting_summary(curated_sorting, backend="sortingview", curation=True)
I get the error:
AttributeError: 'U…
-
Hi,
I don´t understand how to add some data to the unit_table showed in plot_sorting_summary. I see that the `unit_table_properties` arg should do that, but how to use it? The following doesn´t work:…
-
I am using docker ,how to use docker to use GPU?
import os
os.environ['HDF5_PLUGIN_PATH'] = 'D:\\sjwlab\\bxy'
from pprint import pprint
import time
import spikeinterface
import spikeinterface …