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I stumbled upon this while looking at some data for the TPT. There are duplicate interactions in GloBI where the same interaction is ingested from MSB and from Vertnet. An example is:
study_citatio…
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Somehow the usage of `Dataset` got mangled up. There was never agreement, at least with metadata, that an object can only belong to only one `Dataset`. For data management & mining purposes, this doe…
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Hi,
I run salmon then used quantmerge to combine the results as
`salmon quantmerge --quants `cat list_of_quant_folders` --column numreads -o Merged_quants.txt
`
Can I use this as input for t…
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@pbuttigieg recently suggested switching to Dublin Core annotation properties, as opposed to of oboInOwl.
The NMDC team has been using oboInOwl in our templates, like [NMDC-03_EnvO_template_robot_s…
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Hi, i want to implement this code in my system but i face the problem during compiling the bap.
```
#=== ERROR while compiling bap-llvm.2.0.0 =====================================#
# context …
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Hi Matt (@mbookman),
So to continue our discussion from https://github.com/googlegenomics/pipelines-api-examples/pull/10#discussion_r55108121, I understand the REST interface here:
https://www.googl…
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> _**This task force is coodinated by:** @chrisvdt and @lzehl
> **Instructions for contributing:** The first comment provides description of the issue and meant to trigger discussions and collect po…
lzehl updated
2 years ago
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## Challenge Description
Across dataspace participants, the same processing on top of the same datasets are done multiple times. The full ecosystem would benefit from re-use of processing pipelines…
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At last year's rOpenSci event we worked on [a short guide to reproducible research](http://ropensci.github.io/reproducibility-guide/), under @iamciera's guidance. Some of the most interesting progress…