-
```
What steps will reproduce the problem?
1. Read the PDB entry which has the most chains. More than CING can accommodate.
Currently PDB holds 3 entries with more than 49 chains.
E.g. 1otz with:
0,1…
-
This can end up drawing things incorrectly if there are hydrogen atoms included. Below is an example of the possible output:
![rendering-issues](https://cloud.githubusercontent.com/assets/330875/7262…
-
```
even though the check is meant for nucleic acids only:
From check.db:
ID : model_000.pdb
CheckID : PL3CHK
Program : WHAT IF
Version : 6.0 (20080412-0930)
Text : Side chain planar…
-
```
even though the check is meant for nucleic acids only:
From check.db:
ID : model_000.pdb
CheckID : PL3CHK
Program : WHAT IF
Version : 6.0 (20080412-0930)
Text : Side chain planar…
-
```
even though the check is meant for nucleic acids only:
From check.db:
ID : model_000.pdb
CheckID : PL3CHK
Program : WHAT IF
Version : 6.0 (20080412-0930)
Text : Side chain planar…
-
David and I started to rearrange these two terms:
ligand-regulated txn factor activity (GO:0003706)
(is_a "specific RNA polymerase II transcription factor activity")
Def: Functions to enable the tran…
-
```
alexxy@xeon /misc/_Work/acpypi $ ./acpype.py -i benz.pdb
================================================================================
===============
| ACPYPE: AnteChamber PYthon Parser inter…
-
```
Need to be split to separate issues of course:
- reformat: whatif.RAMCHK.valueList: 0.17999999999999999 (+- .)
- link to residues should not have #top in url because it obscures the header
which…
-
here is my directory structure:
ml@ml-laptop:~$ ls
anaconda Desktop Downloads log Music output Public uce-2.5k-probes.fasta
anaconda3 Documents examples.desktop log-path …
-
```
alexxy@xeon /misc/_Work/acpypi $ ./acpype.py -i benz.pdb
================================================================================
===============
| ACPYPE: AnteChamber PYthon Parser inter…