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Please help me setting the data in order to train. Or help me have the simply data to train ( I also download your datas that mentioned but I can not use it)
![image](https://user-images.githubuserco…
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Hi @junyuchen245 , nice collection of transformers for medical imaging.
We have open-sourced UNETR in the following repository:
https://monai.io/research/unetr-btcv-multi-organ-segmentation
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After organizing data according to the tutorial in the GitHub, When I want to train the model this Error is popping up.
Could you help me please?
!nnUNet_train 3d_fullres nnUNetTrainerV2 Task501_Bra…
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Hi there -
I'm new to MONAI and doing some learning of the brain tumor segmentation code - referring to the file brats_segmentation_3d.ipynb under tutorials/3d_segmentation. I'm using this code AS-…
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Hi,
This is a great package and i have been trying to explore this for one of my use case. I have a few questions,
1) I could not find any examples for images which contain mask rather than the …
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Hi there,
I am trying to process some 3D medical images (some .nii.gz files) with openFL but I am having some trouble doing so. My data loader is as follows: ([data loader from 3D_unet model](http…
ghost updated
3 years ago
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Hello, I want to add all the four modes of the BRATS data set to the data set. How can I modify the code?
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Great work! What is the difference between the following below:
config['preprocessed_brats'] = '/PATH/TO/BraTS19_train_preprocessed/'
config['preprocessed_brats_imgs'] = '/PATH/TO/BraTS19_train_im…
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I want to regress the signed distance map with a new head, but it's for a binary mask in your paper. I wonder what should I do if I want to use it for a multi-label mask?
is it possible to get the S…
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Hi,
First of all, thank you for publishing your amazing work.
I'm trying to run the fine-tuning stage on cpc model.
I configured the input layer to receive (32,32,32,4) sized patches so from one …