-
This [line](https://github.com/biocore/emperor/blame/master/scripts/make_emperor.py#L545) checks that the sample names and the summarized taxonomies overlap, which should not be the case. The taxonomi…
-
Virtualbox opened but eventually stalled and tried to gracefully shutdown. Here's the output:
```
hermes:example hermes$ encapsulator --encapsulate matt/example messycode.R fig1_biplot.png
* inst…
MKLau updated
6 years ago
-
It will be nice to be able to color taxa based in their taxonomy string and also show/hide them based on this.
-
There are a few features that I think would be really informative if added properly
- Shapes: https://github.com/biocore/emperor/issues/128
- Taxa colors: https://github.com/biocore/emperor/issues/61
…
-
Once we use the r criteria we don't get the coordinates for every dimension.
Hint: Problems translating from R
-
If there's a summarized taxa table that gets passed and it has a column where all values are zeros, the code will execute just fine but when opening in the browser the following error will come up in …
-
Hi @tfjmp @MKLau,
Thanks for all the help with the R script issue. `encapsulator --info messycode.R` now runs without issues. However, when I try to run the following command:
```
encapsulator --…
-
@gavinsimpson is working to implement **ggplot2** plotting for **vegan** objects in his **ggvegan** package. This is a welcome addition, and really best kept in its separate package. However, I've bee…
-
Hi Guys,
Would it be possible to make loading arrows and loading labels independant for ggbiplot? At the moment loadings = F, loadings.label = T generates both arrows and labels which is identical …
ghost updated
6 years ago
-
The `plot_pca_2d_projection` method plots scores and colors by target. Biplots usually plot the scores and vectors with different scalings (scaling 1: distance, and scaling 2: correlation): biplots co…