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Mac OSX, both failing
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Opening issue to discuss management of content - slide/asset collections, presentation generator plug-ins and so on. The method I have originally thought of was through nedb - which isn't so much a fu…
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On `Mac OS X`
``` julia
using BufferedStreams.BufferedOutputStream
ostream = BufferedOutputStream(open("test.txt", "w"))
write(ostream, "write a new line \n")
flush(ostream)
```
Then
``` shell
cat …
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## Phylo code review - 20th April 2014
### General notes
Overall very good, and a great start for the Bio.jl phylo module. Here I have attempted to map out what would be required to get to a version …
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Just wanted to make you aware that there is a faster version of the interface to Zlib now available. You can find it here: https://github.com/BioJulia/Libz.jl.
Upgrading should be quite painless.
Ho…
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Hi everyone,
As things move forward I was thinking it might be good to have an IRC room for more casual conversations. I created the room `#juliaquantum` on FreeNode for this purpose. Webchat link …
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TL;DR - Is anything preventing us from supporting CIGAR Pad operations right now?
In my line of work, alignments with software like Clustal generate reference-less alignments. E.g.
> Seq1
> CGATCA--…
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Since we are aiming for Bio.jl to run against version 0.4 of Julia, it has been suggested we only keep the 0.4 version of Julia in the TravisCl tests and build. So, core_devs - yay or nay?
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I believe once #37 and #40 are merged, we could publish Bio.jl on Julia repository, and make it available on the pkg manager as soon as possible.
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The idea is to have a list of communities and write a short paragraph about them.
Moreover, we can contact each of them to get opinions and solve: https://github.com/aidanbudd/bosc2015/issues/9
- [Gal…