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General discussion: https://docs.google.com/document/d/1EuGAtT0X5tDbBNFdHeuRfU2RRVOne8CSOJt3lI0U5UY/edit#bookmark=id.c1bmao8g76c5
* [ ] ./io/alignment_file
* [ ] ./io/alignment_file/all.hpp
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nohup bash basalt.sh
[nohup.txt](https://github.com/EMBL-PKU/BASALT/files/15468950/nohup.txt)
[Basalt_log.txt](https://github.com/EMBL-PKU/BASALT/files/15468955/Basalt_log.txt)
[basalt.txt](https…
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Implement more dynamic way to represent needed queue_entry methods:
1. add list of methods to queue_entry.xml. Dynamicaly populated for QueueModel
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Please update assembly.py to run spade as the default assembly software, similar to quality control software the user shall be able to specify the assembly software. The default is spades (http://bioi…
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When constructing a Tube from a set of points, an overlapping section can appear in the Tube on tight corners:
![image](https://github.com/marcomusy/vedo/assets/67565876/ed6b0e60-0766-42a4-8489-d8a…
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Hello, author! EVE is a very good job, Thank you so much for your contributions to the community.
I recently encountered some problems when I was using EVE to score genetic variation. I am looking …
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### Overview
From #1810,
Quoting Peter:
> a new warning when parsing plain text files without a final new line character? e.g. FASTA, FASTQ, EMBL, GenBank, Swiss, ....
>
> The rational he…
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Is there an available script to relax already predicted structure on our HPC? i tried to transfer the code of the notebook https://colab.research.google.com/github/sokrypton/ColabFold/blob/main/beta/r…
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@tpietzsch @axtimwalde @igorpisarev
@constantinpape and myself are working on loading n5 from an AWS object store into bdv. We already have running code and once that is more mature I could also s…