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Another error spotted by one of our user in Apollo 2.1, and I found it in 2.3 too.
On a single exon gene we edit the gene description field (from right click -> edit information). When we close the d…
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Hi @bhofmei, @cmdcolin and @nathandunn,
Is it possible to get this plugin https://github.com/bhofmei/bhofmei-jbplugins running with Apollo?
Thank you in advance,
Michal
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When I updated to the git master, I noticed that the S3 support that previously worked, no longer does:
For example the trackList.json and seq/refSeqs.json that worked in the latest docker containe…
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Hello,
Is there a proper way to change the content of apollo-config.groovy? I tried mounting my modified version like this:
```
volumes:
- ./apollo-config.groovy:/apollo/apollo-config.gr…
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Hi,
Is there a way to enable translating the spliced sequences into the amino acid sequence?
Thank you in advance,
Michal
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It seems as if the following code in main.js is causing an issue by trying to "clone" a config which leads to an error:
```javascript
// load all the classes we need
require( [ tl_c…
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In reference to this:
http://gmod.827538.n3.nabble.com/elastic-search-in-genome-apollo-tp4059909p4060113.html
We either need to remove plugins from the jbrowse trackList.json (to be re-added by …
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Hi,
I'm trying to update my docker image from 2.1.0 to 2.3.0, and I get this JBrowse error:
`Plugin stub not found, please ensure the plugin was included in this JBrowse build.`
My dockerfile i…
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Thanks! I remove all java7 and the command `./apollo run-local` continue, but some steps after an error was found (at the end of this comment has all sequence of steps showed on terminal):
```
| Er…
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- JBrowse version - 1.16.3 and 1.12.4
- Chrome
- It is set up related.
Steps followed to upgrade:
Current version of jbrowse is 1.12.3
Removed comments for sample data tracks on jbrowse.conf f…