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thanks for sharing such a great job,I have read you documentation for the config flags in README.MD,but I have some problems,when i run finetune.py/ exemple_2d.json on the 2d_brats, The error list i…
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After successfully trained the model using my own dataset (i used train_isensee2017.py, model isensee_2017_model.h5 already created, number of label during training was 1).
I run predict.py
Tra…
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Hi Jpvmello, great work, congrats!
Isn't there a bt5_sl4.pth model for the resnet18, which works with 5 classes [T1, T2, T1c, Flair, Others]?
I see only the bt4_sl4.pth model on google drive.
Th…
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Hi, Nic-Ma et al,
Could you kindly explain how to use the Sliding window method for multi-label segmenation problem? What loss function/metric should I use in this regard. I have found a tutorial f…
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![qq 20180911202848](https://user-images.githubusercontent.com/33715651/45360396-0c753d80-b602-11e8-930c-c2906e408996.jpg)
The links above in the picture to load dataset has been out of use ,so i…
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I want to test the performance of the Brats dataset on 3d_lowres and 3d_cascade_fullres network, and when I execute these commands directly, I will be prompted that they do not need to be used. I chan…
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Excuse me, can this project be used on the brats2018 dataset? Have you tried it?
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Hi Fabian,
This is more of a question rather than an issue, as I am trying to understand the conventions used in medical image segmentation.
I noticed that you used a set of conditions to handle…
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Hi David @ellisdg!
First of all, let me congratulate you on this great project! Many Thanks for making it public! I am trying to make it work with my own 3d non-medical dataset. The shape o…
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Hi @ellisdg
I am doing 3d image segmentation for detection stenosis and plague of vessel inside coronary artery. Can I use the code that you provided? My dataset format is also in Nifti format but o…