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---
id: boolnet
version: 2.1.5
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_BoolNet/a8157da6bec2ec6126411d1fdd018f25c0193348/biosimulators.json
specificationsPatch:…
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formatting issue with the Lotka-Volterra model equation
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---
id: cobrapy
version: 0.22.1
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_COBRApy/f4f0e042b5af34592a1aadde83382a8d5e4b3de5/biosimulators.json
specificationsPatch…
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Hi @tyjo,
I am trying to estimate LV parameters from the output of `python main.py estimate` and it gives me first some warnings:
> src/compositional_lotka_volterra.py:79: RuntimeWarning: divide…
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---
id: neuron
version: 8.0.0
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/901465b24132c2aa37f90454edacd1def06ca848/biosimulators-neuron.json
specificatio…
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---
id: pyneuroml
version: 0.5.11
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_pyNeuroML/901465b24132c2aa37f90454edacd1def06ca848/biosimulators-pyneuroml.json
speci…
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---
id: tellurium
version: 2.2.1
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_tellurium/fad56b176f7868f71eb39ea34f1cd8b2fb09d4bb/biosimulators.json
specificatio…
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Would be great to have more ODE example problems. Currently we only have `logistic`, `lotkavolterra`, `fitzhughnagumo`.
Further, I'd like to also have
* three-body (I will post code below)
* sei…
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---
id: pysces
version: 1.0.0
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_PySCeS/c9f885ab577e3292bc2d73ca9cf28a927df0a5fb/biosimulators.json
specificationsPatch:
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---
id: copasi
version: 4.34.251
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_COPASI/4f7bdd0d3fb392ae629f70c3ad960160295d0c42/biosimulators.json
specificationsPatch…