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Needed to correct annotation made using C5 process for a C3 activity!!!!
PMID:28655767
def: The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine.
is_a tRNA methylati…
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We don't seem to have many of these, but I assume most of the activities would be known?
I thought the MFs would be linked to GPI-anchor biosynthesis, but here I find
GO:0018265 GPI ancho…
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These are the datasets. Counts and initial clustering for all except MERFISH are in Dropbox.
- [x] single-cell SMART-seq (Allen)
- [x] single-nucleus SMART-seq (Allen)
- [x] single-cell 10X (Allen)…
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IGV is a very useful viewer for PacBio long read data, but it could be even better with a few modifications. Ideas to improve support for PacBio data are:
1. **Add a "quick consensus" mode** that onl…
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Hi Felix,
Thanks for the excellent work on Bismark,it is so friendly
to use!
I've been using Bismark to process some scBS-seq data, there are some problems confused me a lot about the bismark-methy…
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Hi,
this paper shows a new methyltransferase activity both in human and pombe. PMID:28525753
Would it be possible to create 2 GO terms? One for the process and one for the function?
GO:xxxxxx…
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RTT10 | WD40 domain-containing protein involved in endosomal recycling | | tRNA processing | | UniProt | Saccharomyces cerevisiae S288C | IEA | UniProtKB-KW:KW-0819 | wd repeat protein pthr14344…
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Hi together,
it would be great if you could please add the tool "Defiant" to bioconda. It is a caller for differential methylation and outperformed every other DMR caller in our benchmark studies…
grehl updated
5 years ago
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Hi
I don't think this term and it's child terms are right:
GO:1900410 regulation of histone modification by regulation of transcription from RNA polymerase II promoter
it has 2 pombase annotations
…
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this batch should be taxonomically restricted:
~fhl1 forkhead transcription factor Fhl1 cell differentiation GO_Central Schizosaccharomyces pombe IBA PANTHER:PTN001371846 PAINT_REF:11829 20170…