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Hi,
is there a way to integrate R packages into HaskellR (using nix) that are not available on CRAN?
(My current hypothesis is that packages installed via shell.nix must be available on CRAN.)
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I get ERROR: dependency ‘h5’ is not available for package ‘rssr’
devtools::install_github("stephenslab/rssr",ref="v0.1.0-alpha")
Downloading GitHub repo stephenslab/rssr@v0.1.0-alpha
from URL htt…
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Hi,
I'm new to nix (but have to use it to get HaskellR running, as I'm on Fedora and running into the linker problem described in the FAQ), and I wonder how to add R packages (ggplot2, etc...) to t…
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I want to install dada2 in my directory on a parallel server. It is failed because I was not able to install ‘RcppParallel’. I have a message
installation path not writeable, unable to update packa…
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When I'm trying to install doAzureParallel on a remote node it faces 2 problems
- Infinite execution
```
Job Preparation Status: Package(s) being installed.......................
```
- stder…
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Hi,
I include the following R packages in the pool configuration file:
"rPackages": {
"cran": ["hts", "lubridate", "tidyr", "dplyr"],
"github": []
}
However, they don't g…
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Tried to do a windows RStudio install following the instructions
"install.packages("drat", repos="https://cran.rstudio.com")
drat:::addRepo("dmlc")
install.packages("mxnet")"
I got the below er…
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Two requests:
1) This could utilize directly the more generic phyloseq functions parse_taxonomy_qiime / _default / _greengenes (check the help of those functions for examples) that know how to per…
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Hi,
probably this goes too far, sorry, but I'm asking just in case you'd see a way how to do this.
I'm using nix on Fedora, and I'm trying to use either kerasR (from CRAN) or keras (from github) w…
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Found this through using the `fitdistrplus` package when estimating a generalized pareto distribution, but realized it does the same effect on a number of `p` distribution functions (tested `pgpd`, `p…