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```
(dev3) @beast:~/containers$ docker run -it --rm bids/hcppipelines --version
HCP Pielines BIDS App version v3.17.0-18
(dev3) @beast:~/containers$ singularity run images/bids/bids-hcppipelines-…
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I would like to see as part of the v2.0 standard, a concrete plan of action for creating a robust software ecosystem around BIDS. I believe that standards should come with as complete as possible tool…
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Container fails to build:
https://circleci.com/gh/BIDS-Apps/BROCCOLI/87?utm_campaign=build-failed&utm_medium=email&utm_source=notification
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https://app.circleci.com/pipelines/github/bids-apps/nipypelines/8/workflows/2e35a003-28d2-42da-94e7-1cd1e3bbe60d/jobs/29
[log.txt](https://github.com/bids-apps/nipypelines/files/10343821/log.txt)
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https://app.circleci.com/pipelines/github/bids-apps/aa/32/workflows/44b8665c-0b59-4bd3-890e-e95b65f3ae0b/jobs/228/parallel-runs/0/steps/0-104
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Please at least add simple smoke tests
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## Summary
In the two-compartment model that we use for multi-delay data, we need an estimate for the T1 of gray matter. At the moment, we use a single value across the brain; however, it would be …
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pybids version: 0.9.4
I have corresponding jsons and niftis in a BIDS folder from heudiconv, but nifti.get_metadata often returns a value that is the opposite of what the json contains.
```
In …
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Go through https://github.com/ReproNim/containers#a-typical-workflow
and relate to reproman AWS EC2 cluster workflow: https://github.com/ReproNim/reproman#step-2-create-analysis-datalad-dataset-and-…
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I'm having some trouble running bids-apps/qap and I noticed on the bids apps homepage (http://bids-apps.neuroimaging.io/apps/) that the image is not found. This is also the error I'm getting when I'm …