bids-apps freesurfer issues

bids-apps / freesurfer

BIDS app wrapping recon-all from FreeSurfer

Apache License 2.0

40 stars 35 forks source link

issues

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[pre-commit.ci] pre-commit autoupdate

#86 pre-commit-ci[bot] closed 4 months ago
0
[pre-commit.ci] pre-commit autoupdate

#85 pre-commit-ci[bot] closed 4 months ago
0
Adding the -notal-check flag

#84 augustoielo opened 6 months ago
2
[pre-commit.ci] pre-commit autoupdate

#83 pre-commit-ci[bot] closed 9 months ago
0
Add a flag to ignore specific runs for some subjects

#82 SamGuay opened 10 months ago
1
pass refine_pial args for autorecon resume

#81 bpinsard opened 11 months ago
1
[BUG] - docker tags are wrong in the README.md and run.py

#80 SamGuay opened 11 months ago
3
[MAINT] deploy on all push to main

#79 Remi-Gau closed 11 months ago
1
Seems that some tests for FS7 are failing because they hit the wall time?

#78 Remi-Gau closed 11 months ago
14
Update deployment and add version notice

#77 Shotgunosine closed 12 months ago
16
fix deploy dependencies

#76 Remi-Gau closed 12 months ago
1
update readme to reflect the availibility of both freesurder 6 and 7

#75 Remi-Gau closed 12 months ago
8
ignore

#74 Remi-Gau closed 1 year ago
0
[INFRA] run tests on latest version

#73 Remi-Gau closed 1 year ago
2
[pre-commit.ci] pre-commit autoupdate

#72 pre-commit-ci[bot] closed 1 year ago
0
[pre-commit.ci] pre-commit autoupdate

#71 pre-commit-ci[bot] closed 1 year ago
0
python dependency conflicts when trying to build the latest image

#70 Remi-Gau closed 1 year ago
2
Updating to current version of freesurfer

#69 butellyn closed 1 year ago
4
Possible to skip participants without aparc.stats files?

#68 stong3 opened 3 years ago
0
WIP: Add Freesurfer 7

#67 Shotgunosine closed 1 year ago
70
Question about .annot file

#66 tanjia123456 opened 3 years ago
0
Minimal freesurfer image

#65 commandercool opened 3 years ago
1
how template to fsaverage5?

#64 tanjia123456 closed 3 years ago
0
fix docker login

#63 Shotgunosine closed 4 years ago
1
deploy failure

#62 PeerHerholz closed 4 years ago
1
community standards

#61 PeerHerholz opened 4 years ago
26
Allow lower resolution T2s

#60 Shotgunosine closed 4 years ago
7
Introduce automated image builds

#59 PeerHerholz closed 11 months ago
14
Parellelization

#58 araikes opened 4 years ago
10
Freesurfer 7 version?

#57 eduardklap closed 1 year ago
14
use freesurfer 6.0.1

#56 Shotgunosine closed 4 years ago
2
initial draft of neurodocker support

#55 PeerHerholz closed 4 years ago
10
Use Neurodocker

#54 Shotgunosine closed 4 years ago
3
Update circleci to 2.1 api and fix dockerfile

#53 Shotgunosine closed 4 years ago
13
update Dockerfile so it will build

#52 Shotgunosine closed 4 years ago
2
Option to allow lower resolution T2s

#51 Shotgunosine closed 4 years ago
1
Docker build currently failing

#50 GodloveD closed 4 years ago
2
Support for CUDA

#49 vicmancr opened 4 years ago
0
question about running in parallel

#48 ajdneuro12 opened 4 years ago
2
Build with local freesurfer

#47 Youguang closed 5 years ago
0
Error 1: [Code 50] TASK_NAME_MUST_DEFINE

#46 rsfmt closed 11 months ago
2
Creating symbolic links for the template directories is safer than checking if directories exist while running multiple instances in same directory.

#45 shots47s closed 5 years ago
0
Added the -qcache option and fixed some formatting issues

#44 shots47s closed 5 years ago
0
No T1w nii files found for subject 01. Skipping subject.

#43 tragus1 closed 1 year ago
3
-3T flag option

#42 niniko1997 closed 6 years ago
2
Remove -parallel

#41 chrisgorgo closed 6 years ago
0
fix invocations to include license binds

#40 chrisgorgo closed 6 years ago
0
License not being recognized...

#39 jlhanson5 closed 6 years ago
1
Euler number

#38 fliem closed 6 years ago
3
Workaround/bids validator

#37 jdkent closed 6 years ago
7