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### Publication and Data Information
https://www.nature.com/articles/s41438-019-0227-2
Looks like there may be RNASeq data as well.
### Additional Information
### Checklist
See [New Genome …
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### Publication and Data Information
### Additional Information
Automated annotations are located in `/files/files/automated_annotation/`. There will be a `gene.fasta`, `mRNA.fasta`, and `polype…
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### Publication and Data Information
Contact: Aziz Ebrahini at Purdue
Awaiting:
- 12 fasta files of genomes
- 12 sets of genome annotation
- chloroplast and mitochondrial genomes
Not sure whic…
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This is a follow on from https://github.com/pombase/pombase-chado/issues/678
We're using `owltools --save-closure-for-chado` to generate the closure we load into Chado.
@ValWood noticed that th…
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7.x-5.0
Either the following should be added to "templates/mcl_template_marker.class.inc" after line 123
$cvterms['sequence']['marker_locus'] = -1;
or
includes/class/mcl_chado_c…
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### Publication and Data Information
https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-015-1331-9
### Additional Information
Seems to have two species, possibly assembled as a single …
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### Publication and Data Information
Transcriptome analysis of 4 cultivars, all in a database so probably able to be downloaded:
https://www.biorxiv.org/content/10.1101/301358v1
### Additional…
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### Publication and Data Information
https://www.nature.com/articles/nature06856
This is quite old, lets check around for any newer versions (phytozome, ncbi).
### Additional Information
###…
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### Feature description
We want to improve documentation
First page of documentation is requirements. We really need ot link to the background stuff.
@bradford's idea is that chado is weaklink. …
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Note, these are errors for a successful submission ie not validation errors.
Looks to me like its the mail function accessing indices that werent set in `params` ie that are used in a different m…