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Hello,
Does libra have the same capability as Seurat to only test genes that are detected in a minimum fraction of min.pct cells in either of the two populations when performing differential expres…
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Hi,
I am using tradeSeq to identify TF which are differentially expressed along a lineage of interested. This revealed several significant hits. However, when visualizing the results for a specific…
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Hi,
In the paper "N-of-one differential gene expression without control samples using a deep generative model" it is mentioned that the learned gaussians should yield a clustering of tissues based on…
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Hey tradeSeq developers and users,
I'm currently using the package to understand differential gene expression between nodes and I am having trouble understanding the output. I'm interested in the R…
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Hello!
First words: impressive work! I really like Cerebro :slightly_smiling_face:
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Also, I like some features of [Loupe Cell Browser](https://support.10xgenomics.com/single-cell-gene-expr…
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In the REST API, we have a switch to include nonspecific probes when selecting expression data or differential expression results per gene. This is necessary because we don't want to show probes that …
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[20200301-M_liver1VSM_liver3_Gene_differential_expression.xlsx](https://github.com/evaleiyuhang/practice/files/8935873/20200301-M_liver1VSM_liver3_Gene_differential_expression.xlsx)
[20220619 ma plot…
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### Description of the bug
With test data, volcano plots in interactive reports show differential genes in orange. With my own data, the workflow completes without error, but, as shown in the followi…
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Hi,
I am new to differential expression. I am analysing a single cell dataset with three different conditions and ten cell types. I receive the following error as one cell type in one condition doe…
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Hello,
I wanted to do differential gene expression on the clusters of my data. When I plotted them, I obtained the expressed genes. However, I wanted to know the significance of the number in y-axis …