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Currently, racking the enrichment process within bim2sim requires manual checking of the resulting parameters.
For practical applications we need information on the data that was obtained from the i…
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Currently only run for hg38 and hg19
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### Background and motivation
There are 2 feature requests for .NET 9 which require configuring HttpClient telemetry and logging behavior on per-request basis:
1. To address concerns described i…
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### What would you like to happen?
Like the Enrichment Handlers we have in https://github.com/apache/beam/tree/master/sdks/python/apache_beam/transforms/enrichment_handlers, customer(s) have asked fo…
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At the moment TPS-based acceleration fuel does not depend on how long ago the acceleration event has happened. In order to improve flexibility a taper option is desired
Reported by: rusefi
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@blundar says code is amazing but default values are horrible
We need much more sane defaults
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Hi,
I love the concept of your tool, and am wondering if it would be appropriate to use in a more special l case. I want to evaluate haplotype-resolved de-novo assemblies of a complex region, and I h…
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Hi Authors,
I am trying to reproduce the results of Fig3, I was able to run and finish almost all steps except
```
utils_GWAS.plot_enrichment_per_gene_linked_tiles_peaks([pbmc_ukbb_file], ukbb_f…
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Dear Seppe,
The homer wrapper module has disappeared in the stable version 1.0.a2. This is useful for me to compare with my old homer results. I understand I can use this module in dev version (1.…
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Improve enrichment tabs on result view page and comparison page:
1. data table showing three digits (the plots are showing three digits while the data table is just showing two digits. It's not easy …