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mobinasri
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flagger
Evaluating genome assemblies
MIT License
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Cannot build docker container
#41
GitEnricoNeko
opened
4 days ago
0
end to end wdl run requires more parameters than specified in readme
#40
Dmitry-Antipov
closed
1 week ago
2
Dev hmm flagger v1.0.0
#39
mobinasri
closed
1 month ago
0
Dev hmm flagger v1.0.0
#38
mobinasri
closed
1 month ago
0
Did Flagger also can run with ONT or CLR data?
#37
baozg
opened
1 month ago
1
Could I use Flgger to evaluate the chromosome-level genome assembly
#36
YutingSheep
closed
2 weeks ago
2
Update .dockstore.yml
#35
mobinasri
closed
3 months ago
0
Dev 0.3.0
#34
mobinasri
closed
3 months ago
0
Genomic Reference for Files in FLAGGER_HIFI_PROJECTED_SIMPLIFIED_BEDS/ Directories
#33
NahyunKong
opened
4 months ago
1
Could not localize, doesn't exist
#32
tbenavi1
opened
4 months ago
0
flagger parameters with updated nanopore flow cell
#31
DustinSokolowski
closed
4 months ago
2
Segmentation fault when running depth2cov
#30
KANGYUlab
closed
6 months ago
0
The most appropriate way to estimate sequence coverage
#29
andosl
opened
6 months ago
1
Flagger with sequencing with target enrichment?
#28
MariBGO
opened
7 months ago
1
Marking local
#27
wharvey31
closed
12 months ago
1
Pipeline failing on call_stats step
#26
soisa001
opened
1 year ago
0
Updated files for CHM13-v2.0
#25
wharvey31
opened
1 year ago
0
samtools error: Chromosome blocks not continuous
#24
soisa001
closed
1 year ago
3
Can I skip the step that incorporate the coverage biases in HSats?
#23
ericgonzalezs
opened
1 year ago
1
Removed redundant disk size
#22
mobinasri
closed
1 year ago
0
Cromwell cannot take the size of the input file prior to relocalizing
#21
mobinasri
closed
1 year ago
0
Made blocks more contiguous
#20
mobinasri
closed
1 year ago
0
Updated Flagger version
#19
mobinasri
closed
1 year ago
0
Dev 0.3.0
#18
mobinasri
closed
1 year ago
0
Dev 0.3.0
#17
mobinasri
closed
1 year ago
0
Dev 0.3.0
#16
mobinasri
closed
1 year ago
0
How does Flagger compare to QUAST and BUSCO?
#15
jingydz
opened
1 year ago
0
Updatded docker versions
#14
mobinasri
closed
1 year ago
0
Dev v0.1
#13
mobinasri
closed
1 year ago
0
Install instructions
#12
kiratalreja3
opened
1 year ago
1
Dev v0.1
#11
mobinasri
closed
1 year ago
0
Dev v0.1
#10
mobinasri
closed
1 year ago
0
Dev v0.1
#9
mobinasri
closed
1 year ago
0
Dev v0.1
#8
mobinasri
closed
1 year ago
0
duplicated.bed is empty
#7
zhoudreames
closed
1 year ago
2
Citation
#6
mrvollger
closed
2 years ago
1
A few questions about the WDL pipeline
#5
GuillaumeHolley
closed
1 year ago
6
depth2cov fails silently
#4
GuillaumeHolley
closed
2 years ago
1
Makefile for submodules contains local paths
#3
GuillaumeHolley
closed
2 years ago
4
Space char. in DeepVariant command causes DeepVariant to fail
#2
GuillaumeHolley
closed
2 years ago
3
Add some new features to project_blocks.py
#1
mobinasri
opened
2 years ago
0