-
As we enter our last development cycle before a stable release at schemas, we should shore up some of the orphaned code including removing g2p, vcf_to_ga, any unused or not helpful scripts, convert_er…
-
One natural thing that comes out of implementing the ga4gh api for deployed servers ("real-world", non-example instances) is the need to produce some general tooling / visualizations to allow users to…
-
We could do more to automate the deploy, but I set up Apache to run a "beta" area so that we can host more protocol versions from the same box.
I noticed that someone is developing a client that us…
-
If you've ever set up Apache, then you know it can be a pain. We ship the server to run with the call `ga4gh_server` which uses the flask debug server, but when you set it up to run behind Apache it m…
-
Hi there,
Ive been trying to deploy ga4gh with oidc auth enabled through our own OIDC provider. However, I am encountering the following error after linking ga4gh server with our OIDC auth service
g…
-
We unfortunately missed this, it should be in the release process docs http://ga4gh-server.readthedocs.io/en/stable/development.html#release-process
-
First attempt to run the GWAS workflow deployed on the DNAStack WES Server.
Using the details posted at the first commit [here](https://github.com/DNAstack/plenary-resources-2020).
Plan A
Can the…
-
Enabling DEBUG mode causes the app to throw an `AssertionError`:
```
AssertionError: A setup function was called after the first request was handled. This usually indicates a bug in the applicatio…
-
Callsets can be a member of multiple variant sets according to the schema, yet the reference server is currently underspecified for this case. Is there an example of when a callset is in multiple vari…
-
Metadata input from the data repository is not type checked, which can lead to mysterious server failures at run time (this happens when we run the proto based server against the current ga4gh-example…