ga4gh cloud-interop-testing issues

ga4gh / cloud-interop-testing

Interoperable execution of workflows using GA4GH APIs

Apache License 2.0

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issues

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Duplicate rows in GTEx v8 PFB export

#113 ianfore opened 3 years ago
0
Anvil PFB export from GTEx fails on BigQuery import

#112 ianfore opened 3 years ago
0
Getting results back from DNAStack WES

#111 ianfore opened 4 years ago
6
Execution error on FASP GWAS submission

#110 ianfore opened 4 years ago
3
Use SevenBridges API to perform a compute on an object returned from DRS

#109 ianfore closed 4 years ago
2
Add WES and Discovery Search to FASP Python examples

#108 ianfore opened 4 years ago
2
Explore how to query for large regions of deletions in NCI Cancer Data stored in BigQuery

#107 DavidPotCanuck opened 4 years ago
1
Test out unpacking of DRS Bundles, including objects of different types

#106 ianfore opened 4 years ago
0
Test how content type can be indicated in DRS and acted upon

#105 ianfore opened 4 years ago
0
Mapping accessions/logical entities to DRS/ physical objects

#104 ianfore opened 4 years ago
7
Service Info - we need to add it to DRS, TES, TRS, and WES and make minor releases

#103 briandoconnor opened 4 years ago
2
How to report back full stack success beyond DNAstack/Google demo to FASP

#102 briandoconnor opened 4 years ago
0
How to add WES endpoint

#101 briandoconnor opened 4 years ago
1
Write up background on cart service based on what was found by talking to Elixir, Terra, U. Chicago, etc.

#100 briandoconnor opened 4 years ago
4
Start working with Stephanie Li on video on 5/18 call

#99 briandoconnor opened 4 years ago
1
Planning for FASP Hackathon

#98 briandoconnor opened 4 years ago
11
DNAStack/Google Code from Golden Demo made available, modularized

#97 rishidev opened 4 years ago
1
How to add Data endpoints (DRS)

#96 briandoconnor opened 4 years ago
0
How to add Discovery endpoints (figure out what discovery work happens here)

#95 briandoconnor opened 4 years ago
0
Collect API feedback and provide to work streams - focus on Cloud first since AAI in progress

#94 briandoconnor opened 4 years ago
2
DNAstack/Google write up instructions on how to stand up the golden demo

#93 briandoconnor opened 4 years ago
5
Passport use with APIs, how are access tokens created?

#92 briandoconnor opened 4 years ago
1
DNAstack/Google - writeup of what was learned from golden demo v0 from the 7th Plenary

#91 briandoconnor opened 4 years ago
0
DNAstack/Google - technical implementation writeup for others to follow for Plenary demo, how to add your component

#90 briandoconnor opened 4 years ago
0
Writeup of scientific use case for our work

#89 briandoconnor opened 4 years ago
5
Cloud - Write a pull request for WES showing use of DRS for inputs/outputs

#88 briandoconnor opened 4 years ago
0
Move various testbed-related docs to shared Drive folder

#87 jaeddy opened 4 years ago
0
Add minimal plugin example

#86 jaeddy closed 5 years ago
0
Add a DRS Client

#85 pr80ik closed 5 years ago
4
update readme: add API inconsistencies feedback

#84 pr80ik closed 5 years ago
0
[easy] Update setup.py and add apache license.

#83 DailyDreaming closed 5 years ago
0
Define TRS client.

#82 DailyDreaming closed 5 years ago
0
WIP

#81 pr80ik closed 5 years ago
0
testbed_server failes to launch from develop@0da1136

#80 pr80ik closed 5 years ago
2
Add placeholder controllers

#79 jaeddy closed 5 years ago
0
Investigate use of TravisCI for launching the testbed orchestrator and running tests (at least for now)

#78 briandoconnor opened 5 years ago
0
Create a prototype UI/dashboard for the testbed

#77 jaeddy opened 5 years ago
2
Add docker-compose script for app components

#76 jaeddy opened 5 years ago
0
Update test/plugin models to include attributes, methods for to 'status'

#75 jaeddy opened 5 years ago
0
Repurpose `config.py` code as server class methods and controller functions

#74 jaeddy opened 5 years ago
1
Repurpose `orchestrator.py` code for plugins and tests

#73 jaeddy opened 5 years ago
0
Repurpose `testbed.py` code as TRS/WES test plugin methods

#72 jaeddy opened 5 years ago
0
Set up models and controllers to use database backend

#71 jaeddy opened 5 years ago
0
Create script or notebook with example DRS compliance tests

#70 jaeddy opened 5 years ago
0
Identify and review ready-to-use compliance test packages

#69 jaeddy opened 5 years ago
0
Determine strategy for encoding test plugin methods

#68 jaeddy opened 5 years ago
0
Add DRS service API and client

#67 jaeddy closed 5 years ago
1
October 2018 version of testbed

#66 jaeddy closed 5 years ago
0
Refactor as service

#65 jaeddy closed 5 years ago
0
Create OpenAPI spec for testbed API

#64 jaeddy closed 5 years ago
1