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Would be a nice feature to also be able to write the dataframe to a gtf again. With the attribute column parsed as it is it's impossible to go the opposite direction
rsalz updated
3 months ago
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Is there a way to pass in a non-custom genome build in the read_coldata() step ?
My reads are aligned to a specific mouse strain genome but it is not the standard mm build.
Thanks.
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### The problem
Trying to set up the gtfs integration for the first time, but it doesn't seems to be able to pass the initialization phase due to timeout and throws the following error:
```
2024-…
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The steps in the process:
```
python swiss_to_db.py C:/Users/ue71603/MG_Daten/conversion/swiss/swiss.zip C:/Users/ue71603/MG_Daten/conversion/swiss/swiss-import.duckdb
python epip_db_to_db.py C:/Us…
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GTFS end-point flight data: https://gtfs.api.opendatahub.com/v1/dataset/skyalps-flight-data/raw
GTFS-RT end-points:
https://mobility.api.opendatahub.testingmachine.eu/v2/GTFS-RT
https://mobility.api.…
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Hi, I have included here the link to a repo which is focussed on comparing gtfs stops to osm stops. It is incomplete but feel free to view the progress.
[https://github.com/cjj20/publictransportbu…
cjj20 updated
2 hours ago
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**Describe the bug**
Routing for a GTFS file that has all operational days specified in calendar-dates.txt instead of a regular schedule in calendar.txt seem to fail routing with r5py. As the same GT…
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My RNA-seq data were downloaded from the Internet, and the authors did not elaborate on the type of library built. for --libtype parameter, i try two ways.
one: python3 /public/home/xiaoxiong/minic…
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Tabela que relacione a data com o feed version do GTFS
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Would be good to have an ability to "read" a GTFS feed into a set of useable components based on some specified pre-determined parameters and settings.
The functionality would take one or more GTFS…