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Anyone got a guess as to what this error might mean? I am training on an MGF containing 2,373,619 spectra with Casanovo v3.4.0. According to the stderr output, the training read in 2,373,619 spectra …
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To assist reproducing bugs, please include the following:
* Operating System Debian Bookworm, Ubuntu 22.04
* Python version 3.12
* h5py version (e.g. 3.11.0)
* HDF5 version (e.g. 1.14.2 / 1.14…
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The tests currently skip only if h5py is missing completely.
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Using MSYS2 from http://msys2.github.io/, steps to reproduce:
pacman -S mingw-w64-x86_64-python3-pip
python3 -m pip install numpy
python3 -m pip install h5py
Messages:
C:/msys64/mingw64/…
ahmwb updated
1 month ago
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Right now we only use h5py to append some floats to the .h5 checkpoint file. We really shouldn't be touching the HDF5 file for this purpose anyway. Instead we should either append the XML file or perh…
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The `h5py` package recently released a new version, which uses an old version of `mpi4py` that has a typo. The fixed `mpi4py` is not referenced in the latest version of `h5py`, although they have alre…
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## Bug Report
### Description
When bm.extract() or bm.raster() methods are used, it can not generate the data.
### Reproducibility
- [ ] The bug is reproducible.
#### Steps to Reproduce…
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Is there interest in storing data in the cloud? E.g. using AWS S3. With HDF5 this is problematic since h5py requires a posix-based filesystem. I maintain the h5pyd project (https://github.com/HDFGr…
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I installed the 0_setup.sh file according to the steps, but encountered a build problem with h5py at the last step. Has anyone encountered this before, and how can it be resolved?(Chip is M2)
![2C3…
koosq updated
6 months ago