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Dear BHR team,
I am now trying to estimate the genetic correlations across traits and encounter some problems regarding the output. I want to estimate the genetic correlations between 100 phenotyp…
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https://mp.weixin.qq.com/s/HqGm8RFROMfuEBQtRnQBug
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Hi I've been comparing the performance of kinship matrices produced by PopKin vs those produced by traditional approaches (eg K=GGt/m, where G is the genotype matrix, and m is the number of SNPs).
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https://mp.weixin.qq.com/s/YnO9IeNfvqcJq4gcNWaxeA
ixxmu updated
6 months ago
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Dear Omer,
I am planning to apply PolyFun + SuSiE by including our own functional annotation data (~10 different types) predicted by deep learning model. However, we only have predictions for commo…
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Hi,
in the help, you mention that currently, the same individuals must be used to perform the association and the heritability estimation. This is not practical for meta-analyses. Do you plan on a…
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Hi @voichek,
Thank you for this super useful approach and your paper was also pretty interesting to read. I have a question regarding to heritability results generated by EMMA (find in `EMMA_perm.…
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**Submitting author:** @wrightaprilm (April Wright)
**Repository:** https://github.com/wrightaprilm/treesiftr
**Version:** v1.0.0
**Editor:** @juanklopper
**Reviewer:** @ethanwhite, @rachelss
**Archiv…
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In calculation of tau*, why is the M SNP count hard-coded as 5,961,159 SNPs?
I'm lost where this value is coming from.
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Hi,
I am running multiple model GWAS with multi traits phenotype. Following script I used:
myGAPIT